Thank you for the reply. This actually has to do with the naming of the indexes, not the tables. Somewhere in the installation procedures the script looks for a name of the indexes without a prefix, yet it appears that if converting from OpenX there is a prefix on the index names.
I tried upgrading from 3.06 to 3.10 and received an error that I needed to add 77 indexes. In researching I found that the indexes are there but they have a prefix of ox_ in front of the name that the script is looking for. Is there anyway to update the script to look for the index name with the prefix instead of me having to update 77 indexes to upgrade?